Papers

This is a list of journal articles, preprints, opinion papers, reviews etc. from members of the Haynes Lab.

2014-2019

Vierkant T, Deutschländer R, Sinnott-Armstrong W, Haynes JD (2019). Responsibility Without Freedom? Folk Judgements About Deliberate Actions. Frontiers in Psychology, 10, 1133; DOI: 10.3389/fpsyg.2019.01133.

Soch J, Allefeld C, Haynes JD (2019). Inverse Transformed Encoding Models – a solution to the problem of correlated trial-by-trial parameter estimates in fMRI decoding. bioRxiv, 610626; DOI: 10.1101/610626.

Weygandt M, Behrens J, Brasanac J, Söder E, Meyer-Arndt L, Wakonig K, Ritter K, Brandt AU, Bellmann-Strobl J, Gold SM, Haynes JD, Paul F (2019). Neural mechanisms of perceptual decision-making and their link to neuropsychiatric symptoms in multiple sclerosis. Multiple Sclerosis and Related Disorders, 33, 139-145; DOI: 10.1016/j.msard.2019.05.025.

Eitel F, Soehler E, Bellmann-Strobl J, Brandt AU, Ruprecht K, Giess RM, Kuchling J, Asseyer S, Weygandt M, Haynes JD, Scheel M, Paul F, Ritter K (2019). Uncovering convolutional neural network decisions for diagnosing multiple sclerosis on conventional MRI using layer-wise relevance propagation. arXiv, cs.CV, 1904.08771; DOI: arXiv:1904.08771.

Weygandt M, Spranger J, Leupelt V, Maurer L, Bobbert T, Mai K, Haynes JD (2019). Interactions between neural decision-making circuits predict long-term dietary treatment success in obesity. NeuroImage, 184, 520-534; DOI: 10.1016/j.neuroimage.2018.09.058.

Uithol S, Goergen K, Pischedda D, Toni I, Haynes JD (2018). The context-dependent nature of the neural implementation of intentions. bioRxiv, 401174; DOI: 10.1101/401174.

Görgen K, Hebart MN, Allefeld C, Haynes JD (2018). The same analysis approach: Practical protection against the pitfalls of novel neuroimaging analysis methods. NeuroImage, 180, 19-30; DOI: 10.1016/j.neuroimage.2017.12.083.

Christophel TB, Iamshchinina P, Yan C, Allefeld C, Haynes JD (2018). Cortical specialization for attended versus unattended working memory. Nature Neuroscience, 21, 494; DOI: 10.1038/s41593-018-0094-4.

Chen Y, Cichy RM, Stannat W, Haynes JD (2018). Scale-specific analysis of fMRI data on the irregular cortical surface. NeuroImage, 181, 370-381; DOI: 10.1016/j.neuroimage.2018.07.002.

Reverberi C, Kuhlen AK, Seyed-Allaei S, Greulich RS, Costa A, Abutalebi J, Haynes JD (2018). The neural basis of free language choice in bilingual speakers: Disentangling language choice and language execution. NeuroImage, 177, 108-116; DOI: 10.1016/j.neuroimage.2018.05.025.

Weygandt M, Wakonig K, Behrens J, Meyer-Arndt L, Söder E, Brandt AU, Bellmann-Strobl J, Ruprecht K, Gold SM, Haynes JD, Paul F (2018). Brain activity, regional gray matter loss, and decision-making in multiple sclerosis. Multiple Sclerosis Journal, 24, 1163-1173; DOI: 10.1177/1352458517717089.

Tegelbeckers J, Kanowski M, Krauel K, Haynes JD, Breitling C, Flechtner HH, Kahnt T (2018). Orbitofrontal Signaling of Future Reward is Associated with Hyperactivity in Attention-Deficit/Hyperactivity Disorder. Journal of Neuroscience, 38, 6779-6786; DOI: 10.1523/JNEUROSCI.0411-18.2018.

Haynes JD (2018). Gedankenlesen aus der Hirnaktivität?. Nervenheilkunde, 37, 507-512; DOI: 10.1055/s-0038-1668317.

Winterer G, Androsova G, Bender O, Boraschi D, Borchers F, Dschietzig TB, Feinkohl I, Fletcher P, Gallinat J, Hadzidiakos D, Haynes JD, Heppner F, Hetzer S, Hendrikse J, Ittermann B, Kant IMJ, Kraft A, Krannich A, Krause R, Kühn S, Lachmann G, Montfort SJT, Müller A, Nürnberg P, Ofosu K, Pietsch M, Pischon T, Preller J, Renzulli E, Scheurer K, Schneider R, Slooter AJC, Spies C, Stamatakis E, Volk HD, Weber S, Wolf A, Yürek F, Zacharias N (2018). Personalized risk prediction of postoperative cognitive impairment – rationale for the EU-funded BioCog project. European Psychiatry, 50, 34-39; DOI: 10.1016/j.eurpsy.2017.10.004.

Boehm I, King JA, Bernardoni F, Geisler D, Seidel M, Ritschel F, Goschke T, Haynes JD, Roessner V, Ehrlich S (2018). Subliminal and supraliminal processing of reward-related stimuli in anorexia nervosa. Psychological Medicine, 48, 790-800; DOI: 10.1017/S0033291717002161.

Soch J, Allefeld C (2018). MACS – a new SPM toolbox for model assessment, comparison and selection. Journal of Neuroscience Methods, 306, 19-31; DOI: 10.1016/j.jneumeth.2018.05.017.

Gayet S, Guggenmos M, Christophel TB, Haynes JD, Paffen CLE, Stigchel S, Sterzer P (2017). Visual Working Memory Enhances the Neural Response to Matching Visual Input. The Journal of Neuroscience, 37, 6638-6647; DOI: 10.1523/JNEUROSCI.3418-16.2017.

Ramírez FM (2017). Representational confusion: the plausible consequence of demeaning your data. bioRxiv, 195271; DOI: 10.1101/195271.

Christophel TB, Allefeld C, Endisch C, Haynes JD (2017). View-Independent Working Memory Representations of Artificial Shapes in Prefrontal and Posterior Regions of the Human Brain. Cerebral Cortex, 28, 2146-2161; DOI: 10.1093/cercor/bhx119.

Bogler C, Vowinkel A, Zhutovsky P, Haynes JD (2017). Default Network Activity Is Associated with Better Performance in a Vigilance Task. Frontiers in Human Neuroscience, 11; DOI: 10.3389/fnhum.2017.00623.

Pischedda D, Görgen K, Haynes JD, Reverberi C (2017). Neural Representations of Hierarchical Rule Sets: The Human Control System Represents Rules Irrespective of the Hierarchical Level to Which They Belong. Journal of Neuroscience, 37, 12281-12296; DOI: 10.1523/JNEUROSCI.3088-16.2017.

Loose LS, Wisniewski D, Rusconi M, Goschke T, Haynes JD (2017). Switch-Independent Task Representations in Frontal and Parietal Cortex. Journal of Neuroscience, 37, 8033-8042; DOI: 10.1523/JNEUROSCI.3656-16.2017.

Scheibner HJ, Bogler C, Gleich T, Haynes JD, Bermpohl F (2017). Internal and external attention and the default mode network. NeuroImage, 148, 381-389; DOI: 10.1016/j.neuroimage.2017.01.044.

Kuhlen AK, Bogler C, Brennan SE, Haynes JD (2017). Brains in dialogue: decoding neural preparation of speaking to a conversational partner. Social Cognitive and Affective Neuroscience, 12, 871-880; DOI: 10.1093/scan/nsx018.

Christophel TB, Klink PC, Spitzer B, Roelfsema PR, Haynes JD (2017). The Distributed Nature of Working Memory. Trends in Cognitive Sciences, 21, 111-124; DOI: 10.1016/j.tics.2016.12.007.

Deutschländer R, Pauen M, Haynes JD (2017). Probing folk-psychology: Do Libet-style experiments reflect folk intuitions about free action?. Consciousness and Cognition, 48, 232-245; DOI: 10.1016/j.concog.2016.11.004.

Soch J, Meyer AP, Haynes JD, Allefeld C (2017). How to improve parameter estimates in GLM-based fMRI data analysis: cross-validated Bayesian model averaging. NeuroImage, 158, 186-195; DOI: 10.1016/j.neuroimage.2017.06.056.

Allefeld C, Görgen K, Haynes JD (2016). Valid population inference for information-based imaging: From the second-level t-test to prevalence inference. NeuroImage, 141, 378-392; DOI: 10.1016/j.neuroimage.2016.07.040.

Schultze-Kraft M, Birman D, Rusconi M, Allefeld C, Görgen K, Dähne S, Blankertz B, Haynes JD (2016). The point of no return in vetoing self-initiated movements. Proceedings of the National Academy of Sciences, 113, 1080-1085; DOI: 10.1073/pnas.1513569112.

Soch J, Haynes JD, Allefeld C (2016). How to avoid mismodelling in GLM-based fMRI data analysis: cross-validated Bayesian model selection. NeuroImage, 141, 469-489; DOI: 10.1016/j.neuroimage.2016.07.047.

Weygandt M, Meyer-Arndt L, Behrens JR, Wakonig K, Bellmann-Strobl J, Ritter K, Scheel M, Brandt AU, Labadie C, Hetzer S, Gold SM, Paul F, Haynes JD (2016). Stress-induced brain activity, brain atrophy, and clinical disability in multiple sclerosis. Proceedings of the National Academy of Sciences, 113, 13444-13449; DOI: 10.1073/pnas.1605829113.

Kruse B, Bogler C, Haynes JD, Schütz-Bosbach S (2016). Am I seeing myself, my friend or a stranger? The role of personal familiarity in visual distinction of body identities in the human brain. Cortex, 83, 86-100; DOI: 10.1016/j.cortex.2016.07.010.

Schmack K, Burk J, Haynes JD, Sterzer P (2016). Predicting Subjective Affective Salience from Cortical Responses to Invisible Object Stimuli. Cerebral Cortex, 26, 3453-3460; DOI: 10.1093/cercor/bhv174.

Baggio G, Cherubini P, Pischedda D, Blumenthal A, Haynes JD, Reverberi C (2016). Multiple neural representations of elementary logical connectives. NeuroImage, 135, 300-310; DOI: 10.1016/j.neuroimage.2016.04.061.

Wisniewski D, Goschke T, Haynes JD (2016). Similar coding of freely chosen and externally cued intentions in a fronto-parietal network. NeuroImage, 134, 450-458; DOI: 10.1016/j.neuroimage.2016.04.044.

Haynes JD, Schultze-Kraft M (2016). Reply to Deecke and Soekadar: Do conventional readiness potentials reflect true volitionality?. Proceedings of the National Academy of Sciences of the United States of America, 113, E2877-E2878; DOI: 10.1073/pnas.1604661113.

Anders S, Jong R, Beck C, Haynes JD, Ethofer T (2016). A neural link between affective understanding and interpersonal attraction. Proceedings of the National Academy of Sciences, 113, E2248-E2257; DOI: 10.1073/pnas.1516191113.

Ritter K, Lange C, Weygandt M, Mäurer A, Roberts A, Estrella M, Suppa P, Spies L, Prasad V, Steffen I, Apostolova I, Bittner D, Gövercin M, Brenner W, Mende C, Peters O, Seybold J, Fiebach JB, Steinhagen-Thiessen E, Hampel H, Haynes JD, Buchert R (2016). Combination of Structural MRI and FDG-PET of the Brain Improves Diagnostic Accuracy in Newly Manifested Cognitive Impairment in Geriatric Inpatients. Journal of Alzheimer's Disease, 54, 1319-1331; DOI: 10.3233/JAD-160380.

Hebart MN, Görgen K, Haynes JD (2015). The Decoding Toolbox (TDT): a versatile software package for multivariate analyses of functional imaging data. Frontiers in Neuroinformatics, 8; DOI: 10.3389/fninf.2014.00088.

Wisniewski D, Reverberi C, Momennejad I, Kahnt T, Haynes JD (2015). The Role of the Parietal Cortex in the Representation of Task–Reward Associations. Journal of Neuroscience, 35, 12355-12365; DOI: 10.1523/JNEUROSCI.4882-14.2015.

Guggenmos M, Thoma V, Haynes JD, Richardson-Klavehn A, Cichy RM, Sterzer P (2015). Spatial attention enhances object coding in local and distributed representations of the lateral occipital complex. NeuroImage, 116, 149-157; DOI: 10.1016/j.neuroimage.2015.04.004.

Reverberi C, Kuhlen A, Abutalebi J, Greulich RS, Costa A, Seyed-Allaei S, Haynes JD (2015). Language control in bilinguals: Intention to speak vs. execution of speech. Brain and Language, 144, 1-9; DOI: 10.1016/j.bandl.2015.03.004.

Schuck NW, Gaschler R, Wenke D, Heinzle J, Frensch PA, Haynes JD, Reverberi C (2015). Medial Prefrontal Cortex Predicts Internally Driven Strategy Shifts. Neuron, 86, 331-340; DOI: 10.1016/j.neuron.2015.03.015.

Weygandt M, Mai K, Dommes E, Ritter K, Leupelt V, Spranger J, Haynes JD (2015). Impulse control in the dorsolateral prefrontal cortex counteracts post-diet weight regain in obesity. NeuroImage, 109, 318-327; DOI: 10.1016/j.neuroimage.2014.12.073.

Koch SP, Hägele C, Haynes JD, Heinz A, Schlagenhauf F, Sterzer P (2015). Diagnostic Classification of Schizophrenia Patients on the Basis of Regional Reward-Related fMRI Signal Patterns. PLOS ONE, 10, e0119089; DOI: 10.1371/journal.pone.0119089.

Guggenmos M, Thoma V, Cichy RM, Haynes JD, Sterzer P, Richardson-Klavehn A (2015). Non-holistic coding of objects in lateral occipital complex with and without attention. NeuroImage, 107, 356-363; DOI: 10.1016/j.neuroimage.2014.12.013.

Christophel TB, Cichy RM, Hebart MN, Haynes JD (2015). Parietal and early visual cortices encode working memory content across mental transformations. NeuroImage, 106, 198-206; DOI: 10.1016/j.neuroimage.2014.11.018.

Anders S, Heussen Y, Sprenger A, Haynes JD, Ethofer T (2015). Social gating of sensory information during ongoing communication. NeuroImage, 104, 189-198; DOI: 10.1016/j.neuroimage.2014.10.007.

Weygandt M, Hummel HM, Schregel K, Ritter K, Allefeld C, Dommes E, Huppke P, Haynes JD, Wuerfel J, Gärtner J (2015). MRI-based diagnostic biomarkers for early onset pediatric multiple sclerosis. NeuroImage: Clinical, 7, 400-408; DOI: 10.1016/j.nicl.2014.06.015.

Ritter K, Schumacher J, Weygandt M, Buchert R, Allefeld C, Haynes JD (2015). Multimodal prediction of conversion to Alzheimer's disease based on incomplete biomarkers. Alzheimer's & Dementia: Diagnosis, Assessment & Disease Monitoring, 1, 206-215; DOI: 10.1016/j.dadm.2015.01.006.

Kuhlen AK, Bogler C, Swerts M, Haynes JD (2015). Neural coding of assessing another person’s knowledge based on nonverbal cues. Social Cognitive and Affective Neuroscience, 10, 729-734; DOI: 10.1093/scan/nsu111.

Haynes JD (2015). A Primer on Pattern-Based Approaches to fMRI: Principles, Pitfalls, and Perspectives. Neuron, 87, 257-270; DOI: 10.1016/j.neuron.2015.05.025.

Ramírez FM, Cichy RM, Allefeld C, Haynes JD (2014). The Neural Code for Face Orientation in the Human Fusiform Face Area. Journal of Neuroscience, 34, 12155-12167; DOI: 10.1523/JNEUROSCI.3156-13.2014.

Hebart MN, Schriever Y, Donner TH, Haynes JD (2014). The Relationship between Perceptual Decision Variables and Confidence in the Human Brain. Cerebral Cortex, 26, 118-130; DOI: 10.1093/cercor/bhu181.

Wisniewski D, Reverberi C, Tusche A, Haynes JD (2014). The Neural Representation of Voluntary Task-Set Selection in Dynamic Environments. Cerebral Cortex, 25, 4715-4726; DOI: 10.1093/cercor/bhu155.

Guggenmos M, Rothkirch M, Obermayer K, Haynes JD, Sterzer P (2014). A Hippocampal Signature of Perceptual Learning in Object Recognition. Journal of Cognitive Neuroscience, 27, 787-797; DOI: 10.1162/jocn_a_00735.

Imamoglu F, Heinzle J, Imfeld A, Haynes JD (2014). Activity in high-level brain regions reflects visibility of low-level stimuli. NeuroImage, 102, 688-694; DOI: 10.1016/j.neuroimage.2014.08.045.

Accolla EA, Dukart J, Helms G, Weiskopf N, Kherif F, Lutti A, Chowdhury R, Hetzer S, Haynes JD, Kühn AA, Draganski B (2014). Brain tissue properties differentiate between motor and limbic basal ganglia circuits. Human Brain Mapping, 35, 5083-5092; DOI: 10.1002/hbm.22533.

Bogler C, Mehnert J, Steinbrink J, Haynes JD (2014). Decoding Vigilance with NIRS. PLOS ONE, 9, e101729; DOI: 10.1371/journal.pone.0101729.

Herrojo M, Rusconi M, Brücke C, Haynes JD, Schönecker T, Kühn AA (2014). Encoding of sequence boundaries in the subthalamic nucleus of patients with Parkinson’s disease. Brain, 137, 2715-2730; DOI: 10.1093/brain/awu191.

Soon CS, Allefeld C, Bogler C, Heinzle J, Haynes JD (2014). Predictive brain signals best predict upcoming and not previous choices. Frontiers in Psychology, 5; DOI: 10.3389/fpsyg.2014.00406.

Christophel TB, Haynes JD (2014). Decoding complex flow-field patterns in visual working memory. NeuroImage, 91, 43-51; DOI: 10.1016/j.neuroimage.2014.01.025.

Kahnt T, Park SQ, Haynes JD, Tobler PN (2014). Disentangling neural representations of value and salience in the human brain. Proceedings of the National Academy of Sciences, 111, 5000-5005; DOI: 10.1073/pnas.1320189111.

Haufe S, Meinecke F, Görgen K, Dähne S, Haynes JD, Blankertz B, Bießmann F (2014). On the interpretation of weight vectors of linear models in multivariate neuroimaging. NeuroImage, 87, 96-110; DOI: 10.1016/j.neuroimage.2013.10.067.

Allefeld C, Haynes JD (2014). Searchlight-based multi-voxel pattern analysis of fMRI by cross-validated MANOVA. NeuroImage, 89, 345-357; DOI: 10.1016/j.neuroimage.2013.11.043.

2008-2013

Allefeld C, Soon CS, Bogler C, Heinzle J, Haynes JD (2013). Sequential dependencies between trials in free choice tasks. arXiv, q-bio.NC, 1311.0753; DOI: arXiv:1311.0753.

Betz T, Wilming N, Bogler C, Haynes JD, König P (2013). Dissociation between saliency signals and activity in early visual cortex. Journal of Vision, 13, 6-6; DOI: 10.1167/13.14.6.

Weygandt M, Mai K, Dommes E, Leupelt V, Hackmack K, Kahnt T, Rothemund Y, Spranger J, Haynes JD (2013). The role of neural impulse control mechanisms for dietary success in obesity. NeuroImage, 83, 669-678; DOI: 10.1016/j.neuroimage.2013.07.028.

Momennejad I, Haynes JD (2013). Encoding of Prospective Tasks in the Human Prefrontal Cortex under Varying Task Loads. Journal of Neuroscience, 33, 17342-17349; DOI: 10.1523/JNEUROSCI.0492-13.2013.

Fritz TH, Hardikar S, Demoucron M, Niessen M, Demey M, Giot O, Li Y, Haynes JD, Villringer A, Leman M (2013). Musical agency reduces perceived exertion during strenuous physical performance. Proceedings of the National Academy of Sciences of the United States of America, 110, 17784-17789; DOI: 10.1073/pnas.1217252110.

Schmack K, Castro AGC, Rothkirch M, Sekutowicz M, Rössler H, Haynes JD, Heinz A, Petrovic P, Sterzer P (2013). Delusions and the Role of Beliefs in Perceptual Inference. Journal of Neuroscience, 33, 13701-13712; DOI: 10.1523/JNEUROSCI.1778-13.2013.

Kotz SA, Kalberlah C, Bahlmann J, Friederici AD, Haynes JD (2013). Predicting vocal emotion expressions from the human brain. Human Brain Mapping, 34, 1971-1981; DOI: 10.1002/hbm.22041.

Cichy RM, Sterzer P, Heinzle J, Elliott LT, Ramirez F, Haynes JD (2013). Probing principles of large-scale object representation: Category preference and location encoding. Human Brain Mapping, 34, 1636-1651; DOI: 10.1002/hbm.22020.

Tusche A, Kahnt T, Wisniewski D, Haynes JD (2013). Automatic processing of political preferences in the human brain. NeuroImage, 72, 174-182; DOI: 10.1016/j.neuroimage.2013.01.020.

Soon CS, He AH, Bode S, Haynes JD (2013). Predicting free choices for abstract intentions. Proceedings of the National Academy of Sciences, 110, 6217-6222; DOI: 10.1073/pnas.1212218110.

Bode S, Bogler C, Haynes JD (2013). Similar neural mechanisms for perceptual guesses and free decisions. NeuroImage, 65, 456-465; DOI: 10.1016/j.neuroimage.2012.09.064.

Kuhlen AK, Allefeld C, Haynes JD (2012). Content-specific coordination of listeners' to speakers' EEG during communication. Frontiers in Human Neuroscience, 6; DOI: 10.3389/fnhum.2012.00266.

Hackmack K, Paul F, Weygandt M, Allefeld C, Haynes JD (2012). Multi-scale classification of disease using structural MRI and wavelet transform. NeuroImage, 62, 48-58; DOI: 10.1016/j.neuroimage.2012.05.022.

Reverberi C, Görgen K, Haynes JD (2012). Compositionality of Rule Representations in Human Prefrontal Cortex. Cerebral Cortex, 22, 1237-1246; DOI: 10.1093/cercor/bhr200.

Reverberi C, Görgen K, Haynes JD (2012). Distributed Representations of Rule Identity and Rule Order in Human Frontal Cortex and Striatum. Journal of Neuroscience, 32, 17420-17430; DOI: 10.1523/JNEUROSCI.2344-12.2012.

Imamoglu F, Kahnt T, Koch C, Haynes JD (2012). Changes in functional connectivity support conscious object recognition. NeuroImage, 63, 1909-1917; DOI: 10.1016/j.neuroimage.2012.07.056.

Hebart MN, Donner TH, Haynes JD (2012). Human visual and parietal cortex encode visual choices independent of motor plans. NeuroImage, 63, 1393-1403; DOI: 10.1016/j.neuroimage.2012.08.027.

Hackmack K, Weygandt M, Wuerfel J, Pfueller CF, Bellmann-Strobl J, Paul F, Haynes JD (2012). Can we overcome the ‘clinico-radiological paradox’ in multiple sclerosis?. Journal of Neurology, 259, 2151-2160; DOI: 10.1007/s00415-012-6475-9.

Christophel TB, Hebart MN, Haynes JD (2012). Decoding the Contents of Visual Short-Term Memory from Human Visual and Parietal Cortex. Journal of Neuroscience, 32, 12983-12989; DOI: 10.1523/JNEUROSCI.0184-12.2012.

Weygandt M, Schaefer A, Schienle A, Haynes JD (2012). Diagnosing different binge-eating disorders based on reward-related brain activation patterns. Human Brain Mapping, 33, 2135-2146; DOI: 10.1002/hbm.21345.

Heinzle J, Wenzel MA, Haynes JD (2012). Visuomotor Functional Network Topology Predicts Upcoming Tasks. Journal of Neuroscience, 32, 9960-9968; DOI: 10.1523/JNEUROSCI.1604-12.2012.

Momennejad I, Haynes JD (2012). Human anterior prefrontal cortex encodes the ‘what’ and ‘when’ of future intentions. NeuroImage, 61, 139-148; DOI: 10.1016/j.neuroimage.2012.02.079.

Herrmann B, Maess B, Kalberlah C, Haynes JD, Friederici AD (2012). Auditory perception and syntactic cognition: brain activity-based decoding within and across subjects: Brain-based decoding within and across subjects. European Journal of Neuroscience, 35, 1488-1496; DOI: 10.1111/j.1460-9568.2012.08053.x.

Weygandt M, Blecker CR, Schäfer A, Hackmack K, Haynes JD, Vaitl D, Stark R, Schienle A (2012). fMRI pattern recognition in obsessive–compulsive disorder. NeuroImage, 60, 1186-1193; DOI: 10.1016/j.neuroimage.2012.01.064.

Heinzle J, Anders S, Bode S, Bogler C, Chen Y, Cichy RM, Hackmack K, Kahnt T, Kalberlah C, Reverberi C, Soon CS, Tusche A, Weygandt M, Haynes JD (2012). Multivariate Dekodierung von fMRT-Daten: Auf dem Weg zu einer inhaltsbasierten kognitiven Neurowissenschaft. e-Neuroforum, 18; DOI: 10.1515/nf-2012-0102.

Heinzle J, Anders S, Bode S, Bogler C, Chen Y, Cichy RM, Hackmack K, Kahnt T, Kalberlah C, Reverberi C, Soon CS, Tusche A, Weygandt M, Haynes JD (2012). Multivariate decoding of fMRI data. e-Neuroforum, 18, 1-16; DOI: 10.1007/s13295-012-0026-9.

Heinzle J, Allefeld C, Haynes JD (2012). Information flow, dynamical systems theory and the human brain. Physics of Life Reviews, 9, 78-79; DOI: 10.1016/j.plrev.2011.12.007.

Herrmann B, Obleser J, Kalberlah C, Haynes JD, Friederici AD (2012). Dissociable neural imprints of perception and grammar in auditory functional imaging. Human Brain Mapping, 33, 584-595; DOI: 10.1002/hbm.21235.

Bode S, Bogler C, Soon CS, Haynes JD (2012). The neural encoding of guesses in the human brain. NeuroImage, 59, 1924-1931; DOI: 10.1016/j.neuroimage.2011.08.106.

Bogler C, Bode S, Haynes JD (2011). Decoding Successive Computational Stages of Saliency Processing. Current Biology, 21, 1667-1671; DOI: 10.1016/j.cub.2011.08.039.

Chen Y, Namburi P, Elliott LT, Heinzle J, Soon CS, Chee MWL, Haynes JD (2011). Cortical surface-based searchlight decoding. NeuroImage, 56, 582-592; DOI: 10.1016/j.neuroimage.2010.07.035.

Heinzle J, Kahnt T, Haynes JD (2011). Topographically specific functional connectivity between visual field maps in the human brain. NeuroImage, 56, 1426-1436; DOI: 10.1016/j.neuroimage.2011.02.077.

Cichy RM, Heinzle J, Haynes JD (2011). Imagery and Perception Share Cortical Representations of Content and Location. Cerebral Cortex, 22, 372-380; DOI: 10.1093/cercor/bhr106.

Kahnt T, Heinzle J, Park SQ, Haynes JD (2011). Decoding the Formation of Reward Predictions across Learning. Journal of Neuroscience, 31, 14624-14630; DOI: 10.1523/JNEUROSCI.3412-11.2011.

Gomez A, Rothkirch M, Kaul C, Weygandt M, Haynes JD, Rees G, Sterzer P (2011). Emotion modulates the effects of endogenous attention on retinotopic visual processing. NeuroImage, 57, 1542-1551; DOI: 10.1016/j.neuroimage.2011.05.072.

Bode S, He AH, Soon CS, Trampel R, Turner R, Haynes JD (2011). Tracking the Unconscious Generation of Free Decisions Using UItra-High Field fMRI. PLoS ONE, 6, e21612; DOI: 10.1371/journal.pone.0021612.

Weygandt M, Hackmack K, Pfüller C, Bellmann–Strobl J, Paul F, Zipp F, Haynes JD (2011). MRI Pattern Recognition in Multiple Sclerosis Normal-Appearing Brain Areas. PLoS ONE, 6, e21138; DOI: 10.1371/journal.pone.0021138.

Kalberlah C, Chen Y, Heinzle J, Haynes JD (2011). Beyond topographic representation: Decoding visuospatial attention from local activity patterns in the human frontal cortex. International Journal of Imaging Systems and Technology, 21, 201-210; DOI: 10.1002/ima.20278.

Haynes JD (2011). Multivariate decoding and brain reading: Introduction to the special issue. NeuroImage, 56, 385-386; DOI: 10.1016/j.neuroimage.2011.03.057.

Kahnt T, Heinzle J, Park SQ, Haynes JD (2011). Decoding different roles for vmPFC and dlPFC in multi-attribute decision making. NeuroImage, 56, 709-715; DOI: 10.1016/j.neuroimage.2010.05.058.

Kahnt T, Grueschow M, Speck O, Haynes JD (2011). Perceptual Learning and Decision-Making in Human Medial Frontal Cortex. Neuron, 70, 549-559; DOI: 10.1016/j.neuron.2011.02.054.

Haynes JD (2011). Decoding and predicting intentions. Annals of the New York Academy of Sciences, 1224, 9-21; DOI: 10.1111/j.1749-6632.2011.05994.x.

Cichy RM, Chen Y, Haynes JD (2011). Encoding the identity and location of objects in human LOC. NeuroImage, 54, 2297-2307; DOI: 10.1016/j.neuroimage.2010.09.044.

Lizier JT, Heinzle J, Horstmann A, Haynes JD, Prokopenko M (2011). Multivariate information-theoretic measures reveal directed information structure and task relevant changes in fMRI connectivity. Journal of Computational Neuroscience, 30, 85-107; DOI: 10.1007/s10827-010-0271-2.

Kiefer M, Ansorge U, Haynes JD, Hamker F, Mattler U, Verleger R, Niedeggen M (2011). Neuro-cognitive mechanisms of conscious and unconscious visual perception: From a plethora of phenomena to general principles. Advances in Cognitive Psychology, 7, 55-67; DOI: 10.2478/v10053-008-0090-4.

Anders S, Heinzle J, Weiskopf N, Ethofer T, Haynes JD (2011). Flow of affective information between communicating brains. NeuroImage, 54, 439-446; DOI: 10.1016/j.neuroimage.2010.07.004.

Haynes JD, Pauen M, Wachsmuth I (2011). Announcing Interdisciplinary College 2011 (IK 2011). Cognitive Processing, 12, 135-136; DOI: 10.1007/s10339-010-0382-8.

Kahnt T, Heinzle J, Park SQ, Haynes JD (2010). The neural code of reward anticipation in human orbitofrontal cortex. Proceedings of the National Academy of Sciences, 107, 6010-6015; DOI: 10.1073/pnas.0912838107.

Tusche A, Bode S, Haynes JD (2010). Neural Responses to Unattended Products Predict Later Consumer Choices. Journal of Neuroscience, 30, 8024-8031; DOI: 10.1523/JNEUROSCI.0064-10.2010.

Howard JD, Plailly J, Grueschow M, Haynes JD, Gottfried JA (2009). Odor quality coding and categorization in human posterior piriform cortex. Nature Neuroscience, 12, 932-938; DOI: 10.1038/nn.2324.

Haynes JD (2009). Decoding visual consciousness from human brain signals. Trends in Cognitive Sciences, 13, 194-202; DOI: 10.1016/j.tics.2009.02.004.

Corney D, Haynes JD, Rees G, Lotto RB (2009). The Brightness of Colour. PLoS ONE, 4, e5091; DOI: 10.1371/journal.pone.0005091.

Bode S, Haynes JD (2009). Decoding sequential stages of task preparation in the human brain. NeuroImage, 45, 606-613; DOI: 10.1016/j.neuroimage.2008.11.031.

Soon CS, Brass M, Heinze HJ, Haynes JD (2008). Unconscious determinants of free decisions in the human brain. Nature Neuroscience, 11, 543-545; DOI: 10.1038/nn.2112.

Bengtsson SL, Haynes JD, Sakai K, Buckley MJ, Passingham RE (2008). The Representation of Abstract Task Rules in the Human Prefrontal Cortex. Cerebral Cortex, 19, 1929-1936; DOI: 10.1093/cercor/bhn222.

Sterzer P, Haynes JD, Rees G (2008). Fine-scale activity patterns in high-level visual areas encode the category of invisible objects. Journal of Vision, 8, 10-10; DOI: 10.1167/8.15.10.

Wright ND, Mechelli A, Noppeney U, Veltman DJ, Rombouts SARB, Glensman J, Haynes JD, Price CJ (2008). Selective activation around the left occipito-temporal sulcus for words relative to pictures: Individual variability or false positives?. Human Brain Mapping, 29, 986-1000; DOI: 10.1002/hbm.20443.

Bles M, Haynes JD (2008). Detecting concealed information using brain-imaging technology. Neurocase, 14, 82-92; DOI: 10.1080/13554790801992784.

Haynes JD (2008). Detecting deception from neuroimaging signals – a data-driven perspective. Trends in Cognitive Sciences, 12, 126-127; DOI: 10.1016/j.tics.2008.01.003.

Eger E, Ashburner J, Haynes JD, Dolan RJ, Rees G (2008). fMRI Activity Patterns in Human LOC Carry Information about Object Exemplars within Category. Journal of Cognitive Neuroscience, 20, 356-370; DOI: 10.1162/jocn.2008.20019.

Sumner P, Anderson EJ, Sylvester R, Haynes JD, Rees G (2008). Combined orientation and colour information in human V1 for both L–M and S-cone chromatic axes. NeuroImage, 39, 814-824; DOI: 10.1016/j.neuroimage.2007.09.013.

1997-2007

Haynes JD, Sakai K, Rees G, Gilbert S, Frith C, Passingham RE (2007). Reading Hidden Intentions in the Human Brain. Current Biology, 17, 323-328; DOI: 10.1016/j.cub.2006.11.072.

Weil RS, Kilner JM, Haynes JD, Rees G (2007). Neural correlates of perceptual filling-in of an artificial scotoma in humans. Proceedings of the National Academy of Sciences, 104, 5211-5216; DOI: 10.1073/pnas.0609294104.

Sterzer P, Haynes JD, Rees G (2006). Primary visual cortex activation on the path of apparent motion is mediated by feedback from hMT+/V5. NeuroImage, 32, 1308-1316; DOI: 10.1016/j.neuroimage.2006.05.029.

Ruff CC, Blankenburg F, Bjoertomt O, Bestmann S, Freeman E, Haynes JD, Rees G, Josephs O, Deichmann R, Driver J (2006). Concurrent TMS-fMRI and Psychophysics Reveal Frontal Influences on Human Retinotopic Visual Cortex. Current Biology, 16, 1479-1488; DOI: 10.1016/j.cub.2006.06.057.

Watkins S, Shams L, Tanaka S, Haynes JD, Rees G (2006). Sound alters activity in human V1 in association with illusory visual perception. NeuroImage, 31, 1247-1256; DOI: 10.1016/j.neuroimage.2006.01.016.

Haynes JD, Rees G (2006). Decoding mental states from brain activity in humans. Nature Reviews Neuroscience, 7, 523-534; DOI: 10.1038/nrn1931.

Haken H, Stadler M, Ditzinger T, Haynes JD (2005). Synergetics of Perception and Consciousness. Gestalt Theory, 27, 8-28.

Haynes JD, Driver J, Rees G (2005). Visibility Reflects Dynamic Changes of Effective Connectivity between V1 and Fusiform Cortex. Neuron, 46, 811-821; DOI: 10.1016/j.neuron.2005.05.012.

Sylvester R, Haynes JD, Rees G (2005). Saccades Differentially Modulate Human LGN and V1 Responses in the Presence and Absence of Visual Stimulation. Current Biology, 15, 37-41; DOI: 10.1016/j.cub.2004.12.061.

Haynes JD, Rees G (2005). Predicting the orientation of invisible stimuli from activity in human primary visual cortex. Nature Neuroscience, 8, 686-691; DOI: 10.1038/nn1445.

Haynes JD, Deichmann R, Rees G (2005). Eye-specific effects of binocular rivalry in the human lateral geniculate nucleus. Nature, 438, 496-499; DOI: 10.1038/nature04169.

Haynes JD, Tregellas J, Rees G (2005). Attentional integration between anatomically distinct stimulus representations in early visual cortex. Proceedings of the National Academy of Sciences, 102, 14925-14930; DOI: 10.1073/pnas.0501684102.

Bristow D, Haynes JD, Sylvester R, Frith CD, Rees G (2005). Blinking Suppresses the Neural Response to Unchanging Retinal Stimulation. Current Biology, 15, 1296-1300; DOI: 10.1016/j.cub.2005.06.025.

Haynes JD, Rees G (2005). Predicting the Stream of Consciousness from Activity in Human Visual Cortex. Current Biology, 15, 1301-1307; DOI: 10.1016/j.cub.2005.06.026.

Haynes JD, Lotto RB, Rees G (2004). Responses of human visual cortex to uniform surfaces. Proceedings of the National Academy of Sciences, 101, 4286-4291; DOI: 10.1073/pnas.0307948101.

Rees G, Haynes JD (2004). Peer commentary on "Are There Neural Correlates of Consciousness": Causal or representational holism?. Journal of Consciousness Studies, 11, 42-45.

Haynes JD, Roth G, Stadler M, Heinze HJ (2003). Neuromagnetic Correlates of Perceived Contrast in Primary Visual Cortex. Journal of Neurophysiology, 89, 2655-2666; DOI: 10.1152/jn.00820.2002.

Herrmann M, Haynes JD (2002). What’s behind a scoopy title?. Research in Complementary and Classical Natural Medicine, 9, 237-239.

Otterpohl JR, Haynes JD, Emmert-Streib F, Vetter G, Pawelzik K (2001). Erratum to “Extracting the dynamics of perceptual switching from ‘noisy’ behaviour: An application of hidden Markov modelling to pecking data from pigeons” [Journal of Physiology-Paris 94 (5–6) pp. 555–567 (2000)]. Journal of Physiology-Paris, 95, 497; DOI: 10.1016/S0928-4257(01)00091-2.

Otterpohl JR, Haynes JD, Emmert-Streib F, Vetter G, Pawelzik K (2000). Extracting the dynamics of perceptual switching from ‘noisy’ behaviour: An application of hidden Markov modelling to pecking data from pigeons. Journal of Physiology-Paris, 94, 555-567; DOI: 10.1016/S0928-4257(00)01095-0.

Vetter G, Haynes JD, Pfaff S (2000). Evidence for multistability in the visual perception of pigeons. Vision Research, 40, 2177-2186; DOI: 10.1016/S0042-6989(00)00070-5.

Haynes JD (1999). Freiheit, Indeterminismus oder Unprognostizierbarkeit? Die Annahme der Willensfreiheit und ihre Konsequenzen für die Sozialwissenschaften. Ethik und Sozialwissenschaften, 10, 289-290.

Cleeremans A, Haynes JD (1999). Correlating Consciousness: A View from Empirical Science. Revue Internationale de Philosophie, 53, 387-420.

Haynes JD, Roth G, Schwegler H, Stadler M (1998). Die funktionale Rolle des bewußt Erlebten. Gestalt Theory, 20, 186-213.

Vetter G, Stadler M, Haynes JD (1997). Phase Transitions in Learning. The Journal of Mind and Behavior, 18, 335-350.